Biotechnology

AP Biology· difficulty 4/5

A researcher uses RNA interference (siRNA) to knock down expression of gene X in cultured human cells. Western blot is performed to measure protein X levels in: (1) untreated cells, (2) cells transfected with X-targeting siRNA, (3) cells transfected with scrambled (control) siRNA. After 48 hours, cell proliferation is measured.

Untreat scram X-siRNA X actin Western blot

Why is the scrambled siRNA control essential?

  • A

    To eliminate cell death

  • B

    To increase X protein levels

  • C

    To distinguish specific knockdown effects from generic effects of siRNA transfection

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  • D

    To replace siRNA with another molecule

Explanation

Transfection itself can stress cells and alter gene expression. The scrambled control matches all conditions except sequence specificity. Differences between X-siRNA and scrambled samples are attributed to specific X knockdown.

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