Biotechnology

AP Biology· difficulty 1/5

EcoRI recognizes the palindromic sequence GAATTC and cuts both strands between G and A, generating four-nucleotide 5' overhangs.

EcoRI recognition site 5' G A A T T C 3' 3' C T T A A G 5' Cuts produce 5' overhangs (sticky ends)

What feature of EcoRI's cleavage pattern enables ligation between two DNA molecules cut by the same enzyme?

  • A

    EcoRI methylates the overhangs to enhance ligation.

  • B

    EcoRI cuts both strands at the same position, creating blunt ends that randomly join.

  • C

    The ends are phosphorylated by EcoRI.

  • D

    Both fragments have complementary single-stranded overhangs that can anneal.

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Explanation

EcoRI cleaves between G and A on both strands, leaving 5' AATT overhangs. Identical sticky ends from any source can base-pair and be sealed by DNA ligase, the basis of recombinant DNA cloning.

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